STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
alpk2Uncharacterized protein. (1490 aa)    
Predicted Functional Partners:
hypk
Huntingtin interacting protein K.
    
   0.847
LOC113030212
N(alpha)-acetyltransferase 15, NatA auxiliary subunit a.
    
   0.744
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
    
   0.744
LOC113020105
ABI family, member 3a.
    
 
 0.661
ENSACLP00000034137
Uncharacterized protein.
      
 0.661
c22h18orf21
Si:dkey-184p18.2.
      
 0.659
ap5s1
Adaptor related protein complex 5 subunit sigma 1.
      
 0.656
rsrp1
Arginine/serine-rich protein 1.
      
 0.655
ECHDC3
Enoyl-CoA hydratase domain containing 3.
      
 0.654
tbc1d31
TBC1 domain family, member 31.
      
 0.611
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.