Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023987Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (188 aa)    
Predicted Functional Partners:
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.995
ENSACLP00000012032
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.995
trappc10
Trafficking protein particle complex 10.
    
 0.994
ENSACLP00000003055
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.993
trappc8
Trafficking protein particle complex 8.
    
 0.992
trappc2l
Trafficking protein particle complex 2-like.
   
 0.991
trappc13
Trafficking protein particle complex 13.
    
 0.991
LOC113013623
Trafficking protein particle complex 6b.
    
 0.987
trappc11
Trafficking protein particle complex 11.
    
 0.985
TRAPPC2B
Trafficking protein particle complex 2B.
    
 0.984
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.