STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007097Uncharacterized protein. (101 aa)    
Predicted Functional Partners:
syk
Tyrosine-protein kinase.
   
 0.983
ENSACLP00000016464
Tyrosine-protein kinase.
   
 0.979
tyrobp
Uncharacterized protein.
   
  
 0.970
ENSACLP00000011133
Uncharacterized protein.
   
 0.929
ENSACLP00000015902
Uncharacterized protein.
   
 0.929
ENSACLP00000037258
C-type lectin domain-containing protein.
    
  0.853
LOC113031955
Si:ch73-86n18.1.
    
  0.853
LOC113033627
Asialoglycoprotein receptor-like 1.
    
  0.833
ENSACLP00000024030
C-type lectin domain-containing protein.
    
  0.832
LOC113012213
C-type lectin domain-containing protein.
    
  0.832
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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