STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrap3Thyroid hormone receptor associated protein 3b. (903 aa)    
Predicted Functional Partners:
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.682
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.651
ENSACLP00000024801
Ig-like domain-containing protein.
   
  0.627
LOC113013820
Necdin-like 2.
    
 0.620
rhbdl3
Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
    
  0.600
micall2
Mical-like 2a.
    
  0.585
ENSACLP00000008450
Mical-like 2b.
    
  0.585
micall1
MICAL-like 1a.
    
  0.585
ENSACLP00000001054
Glucosidase, alpha; neutral C; Belongs to the glycosyl hydrolase 31 family.
    
 0.580
ENSACLP00000009114
ATRX chromatin remodeler.
   
 0.551
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.