Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnah7Dynein, axonemal, heavy chain 7. (3914 aa)    
Predicted Functional Partners:
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 0.925
dnali1
Dynein, axonemal, light intermediate chain 1.
  
 0.912
dctn2
Dynactin 2 (p50).
    
 0.864
dnal4
Dynein light chain.
    
 0.795
WDR63
WD repeat domain 63.
   
 0.779
dnai2
Dynein, axonemal, intermediate chain 2b.
   
 0.774
dnal1
Dynein, axonemal, light chain 1.
    
 0.765
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.753
cfap44
Uncharacterized protein.
   
 0.727
ENSACLP00000003705
Uncharacterized protein.
   
 0.715
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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