STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113013133Aldo_ket_red domain-containing protein. (452 aa)    
Predicted Functional Partners:
LOC113026534
Potassium voltage-gated channel, shaker-related subfamily, member 1a; Belongs to the potassium channel family.
   
 0.778
nup133
Nucleoporin 133.
   
 0.753
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.750
kcnh5
Potassium voltage-gated channel, subfamily H (eag-related), member 5b.
    
 0.746
LOC113007126
Uncharacterized protein.
    
 0.746
LOC113024721
Uncharacterized protein.
    
 0.746
LOC113035347
Potassium voltage-gated channel, subfamily H (eag-related), member 1a.
    
 0.746
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.738
ENSACLP00000017955
Potassium voltage-gated channel, shaker-related subfamily, member 4; Belongs to the potassium channel family.
   
 0.717
ENSACLP00000032731
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
    
 0.693
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (22%) [HD]