ENSACLP00000007141 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000007141

Uncharacterized protein. (1064 aa)

Predicted Functional Partners:

ubfd1

0.717

ENSACLP00000033328

0.703

snrpd2

0.694

ENSACLP00000030794

0.662

tmem234

0.655

ENSACLP00000007109

0.647

LOC113011845

0.641

armc7

0.638

LOC113030189

0.636

SLC6A20

0.612

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000007109	ENSACLP00000007141	ENSACLP00000007109	ENSACLP00000007141	WD repeat domain 17.	Uncharacterized protein.	0.647
ENSACLP00000007141	ENSACLP00000007109	ENSACLP00000007141	ENSACLP00000007109	Uncharacterized protein.	WD repeat domain 17.	0.647
ENSACLP00000007141	ENSACLP00000030794	ENSACLP00000007141	ENSACLP00000030794	Uncharacterized protein.	Kelch domain containing 4.	0.662
ENSACLP00000007141	ENSACLP00000033328	ENSACLP00000007141	ENSACLP00000033328	Uncharacterized protein.	DUF4536 domain-containing protein.	0.703
ENSACLP00000007141	LOC113011845	ENSACLP00000007141	ENSACLP00000010333	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.641
ENSACLP00000007141	LOC113030189	ENSACLP00000007141	ENSACLP00000019132	Uncharacterized protein.	Uncharacterized protein.	0.636
ENSACLP00000007141	SLC6A20	ENSACLP00000007141	ENSACLP00000007837	Uncharacterized protein.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.612
ENSACLP00000007141	armc7	ENSACLP00000007141	ENSACLP00000034727	Uncharacterized protein.	Armadillo repeat containing 7.	0.638
ENSACLP00000007141	snrpd2	ENSACLP00000007141	ENSACLP00000002556	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.694
ENSACLP00000007141	tmem234	ENSACLP00000007141	ENSACLP00000023445	Uncharacterized protein.	Transmembrane protein 234.	0.655
ENSACLP00000007141	ubfd1	ENSACLP00000007141	ENSACLP00000008136	Uncharacterized protein.	Ubiquitin family domain containing 1.	0.717
ENSACLP00000030794	ENSACLP00000007141	ENSACLP00000030794	ENSACLP00000007141	Kelch domain containing 4.	Uncharacterized protein.	0.662
ENSACLP00000030794	ENSACLP00000033328	ENSACLP00000030794	ENSACLP00000033328	Kelch domain containing 4.	DUF4536 domain-containing protein.	0.662
ENSACLP00000030794	armc7	ENSACLP00000030794	ENSACLP00000034727	Kelch domain containing 4.	Armadillo repeat containing 7.	0.614
ENSACLP00000033328	ENSACLP00000007141	ENSACLP00000033328	ENSACLP00000007141	DUF4536 domain-containing protein.	Uncharacterized protein.	0.703
ENSACLP00000033328	ENSACLP00000030794	ENSACLP00000033328	ENSACLP00000030794	DUF4536 domain-containing protein.	Kelch domain containing 4.	0.662
ENSACLP00000033328	armc7	ENSACLP00000033328	ENSACLP00000034727	DUF4536 domain-containing protein.	Armadillo repeat containing 7.	0.638
LOC113011845	ENSACLP00000007141	ENSACLP00000010333	ENSACLP00000007141	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.641
LOC113030189	ENSACLP00000007141	ENSACLP00000019132	ENSACLP00000007141	Uncharacterized protein.	Uncharacterized protein.	0.636
SLC6A20	ENSACLP00000007141	ENSACLP00000007837	ENSACLP00000007141	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Uncharacterized protein.	0.612