GOLGA7 protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

GOLGA7

Golgin A7. (143 aa)

Predicted Functional Partners:

ENSACLP00000019996

0.891

LOC113024799

0.891

zdhhc8

0.891

ENSACLP00000001482

0.794

LOC113018686

0.740

LOC113024265

0.740

LOC113025727

0.717

LOC113025211

0.708

LOC113015412

0.669

zdhhc18

0.669

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001482	GOLGA7	ENSACLP00000001482	ENSACLP00000007151	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Golgin A7.	0.794
ENSACLP00000019996	GOLGA7	ENSACLP00000019996	ENSACLP00000007151	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Golgin A7.	0.891
ENSACLP00000019996	LOC113018686	ENSACLP00000019996	ENSACLP00000004849	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Claudin domain containing 1a.	0.730
ENSACLP00000019996	LOC113024265	ENSACLP00000019996	ENSACLP00000030525	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Claudin domain containing 1.	0.730
GOLGA7	ENSACLP00000001482	ENSACLP00000007151	ENSACLP00000001482	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.794
GOLGA7	ENSACLP00000019996	ENSACLP00000007151	ENSACLP00000019996	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.891
GOLGA7	LOC113015412	ENSACLP00000007151	ENSACLP00000014411	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.669
GOLGA7	LOC113018686	ENSACLP00000007151	ENSACLP00000004849	Golgin A7.	Claudin domain containing 1a.	0.740
GOLGA7	LOC113024265	ENSACLP00000007151	ENSACLP00000030525	Golgin A7.	Claudin domain containing 1.	0.740
GOLGA7	LOC113024799	ENSACLP00000007151	ENSACLP00000026428	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.891
GOLGA7	LOC113025211	ENSACLP00000007151	ENSACLP00000016149	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.708
GOLGA7	LOC113025727	ENSACLP00000007151	ENSACLP00000021091	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.717
GOLGA7	zdhhc18	ENSACLP00000007151	ENSACLP00000018641	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.669
GOLGA7	zdhhc8	ENSACLP00000007151	ENSACLP00000029384	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.891
LOC113015412	GOLGA7	ENSACLP00000014411	ENSACLP00000007151	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Golgin A7.	0.669
LOC113018686	ENSACLP00000019996	ENSACLP00000004849	ENSACLP00000019996	Claudin domain containing 1a.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.730
LOC113018686	GOLGA7	ENSACLP00000004849	ENSACLP00000007151	Claudin domain containing 1a.	Golgin A7.	0.740
LOC113018686	LOC113024799	ENSACLP00000004849	ENSACLP00000026428	Claudin domain containing 1a.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.730
LOC113018686	LOC113025727	ENSACLP00000004849	ENSACLP00000021091	Claudin domain containing 1a.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.602
LOC113018686	zdhhc8	ENSACLP00000004849	ENSACLP00000029384	Claudin domain containing 1a.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.730