STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr2c2apNuclear receptor 2C2-associated protein. (141 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
 0.790
ENSACLP00000037094
Im:7152348.
    
 0.746
nr2c1
Nuclear receptor subfamily 2, group C, member 1.
    
 0.726
slc35e1
Solute carrier family 35 member E1.
      
 0.713
ddx49
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family.
    
 
 0.682
ENSACLP00000024895
Zinc finger and BTB domain containing 3.
    
 
 0.673
cherp
Calcium homeostasis endoplasmic reticulum protein.
      
 0.655
SUGP1
SURP and G-patch domain containing 1.
      
 0.635
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.627
rfxank
Regulatory factor X-associated ankyrin-containing protein.
   
 0.616
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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