STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021353PLA2c domain-containing protein. (585 aa)    
Predicted Functional Partners:
LOC113023601
Uncharacterized protein.
   
 
 0.890
ENSACLP00000011204
Platelet-activating factor acetylhydrolase.
     
 0.885
pla2g12a
Phospholipase A2, group XIIA.
     
 0.877
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.873
LOC113019998
Phospholipase A(2).
     
 0.870
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 
 0.868
ENSACLP00000030440
Phospholipase A2, group XV.
     
 0.865
LOC113006763
Lipoxygenase domain-containing protein.
     
 0.863
pnpla6
Patatin-like phospholipase domain containing 6.
   
 
 0.863
ENSACLP00000019527
Phospholipase.
     
 0.861
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.