Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113034053Arrestin_C domain-containing protein. (355 aa)    
Predicted Functional Partners:
ENSACLP00000001688
Thioredoxin 2.
    
 0.579
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.493
ENSACLP00000018114
Thioredoxin; Belongs to the thioredoxin family.
    
 0.483
LOC113018910
Thioredoxin; Belongs to the thioredoxin family.
    
 0.483
LOC113018911
Thioredoxin; Belongs to the thioredoxin family.
    
 0.483
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
  0.420
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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