Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptpn23Protein tyrosine phosphatase, non-receptor type 23, a. (1924 aa)    
Predicted Functional Partners:
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.985
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.975
grb2
Growth factor receptor-bound protein 2b.
    
 0.950
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
 0.949
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.910
LOC113029912
Charged multivesicular body protein 4C.
   
 0.907
ENSACLP00000008998
Uncharacterized protein.
   
 0.907
LOC113022184
Uncharacterized protein.
   
 0.907
chmp4b
Charged multivesicular body protein 4Bb.
   
 0.907
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.877
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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