STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trip13Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family. (423 aa)    
Predicted Functional Partners:
mad2l1bp
MAD2L1 binding protein.
    
 
 0.987
ENSACLP00000008361
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 
 0.957
ENSACLP00000008418
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 
 0.957
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 
 0.953
mad2l2
Mitotic arrest deficient 2 like 2.
    
 
 0.940
dmc1
Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.
  
 0.936
ENSACLP00000035671
Cell division cycle 20 homolog.
  
 
 0.934
ENSACLP00000038411
Cell division cycle 20 homolog.
  
 
 0.934
hormad1-2
HORMA domain containing 1.
   
 
 0.931
ENSACLP00000018753
Zebrafish testis-expressed 38.
   
 
 0.931
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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