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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007208Endostatin domain-containing protein. (234 aa)    
Predicted Functional Partners:
mmp9
Matrix metallopeptidase 9.
    
 0.648
LOC113007686
Uncharacterized protein.
 
 
 0.444
LOC113010710
Collagen, type VI, alpha 2.
 
 
 0.444
LOC113028545
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 0.435
LOC113020103
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.435
ENSACLP00000014077
Uncharacterized protein.
    
 
 0.434
ENSACLP00000038574
Nucleolin.
    
 
 0.434
ENSACLP00000000234
Matrix metallopeptidase 13b.
    
  0.423
ENSACLP00000000297
Matrix metallopeptidase 20b (enamelysin).
    
  0.423
LOC113036136
Matrix metallopeptidase 20a (enamelysin).
    
  0.423
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.