STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007224Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family. (80 aa)    
Predicted Functional Partners:
rpp30
Uncharacterized protein.
   
 
 0.836
rpp21
Ribonuclease P 21 subunit.
   
 
  0.835
ENSACLP00000002583
Uncharacterized protein.
   
   0.720
ENSACLP00000037515
Immediate early response 3 interacting protein 1.
   
   0.720
ENSACLP00000010524
Alba domain-containing protein.
   
 
 0.699
ENSACLP00000020737
Ribonuclease P/MRP 25 subunit-like.
   
 
 0.699
ENSACLP00000023883
Ribonuclease P and MRP subunit p25, b.
   
 
 0.699
snrpg
Small nuclear ribonucleoprotein G.
   
    0.652
hsdl2
Hydroxysteroid dehydrogenase like 2.
    
  0.595
scfd1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.588
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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