Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007224Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family. (80 aa)    
Predicted Functional Partners:
usp32
Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family.
      
 0.807
ENSACLP00000002583
Uncharacterized protein.
   
 
 0.806
ENSACLP00000037515
Immediate early response 3 interacting protein 1.
   
 
 0.806
rpp30
Uncharacterized protein.
   
 
 0.802
pop4
POP4 homolog, ribonuclease P/MRP subunit.
     
  0.800
pop1
POP1 homolog, ribonuclease P/MRP subunit.
     
  0.800
ENSACLP00000031190
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
  0.800
sf3b5
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
    0.726
scfd1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.725
rabgap1
RAB GTPase activating protein 1.
      
 0.719
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (46%) [HD]