Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113023519Fibrinogen C-terminal domain-containing protein. (357 aa)    
Predicted Functional Partners:
fgg
Fibrinogen gamma chain.
   
 
 
0.914
ENSACLP00000003518
Uncharacterized protein.
   
 0.820
APOH
Apolipoprotein H.
   
 0.820
fgb
Fibrinogen beta chain.
   
 
 
0.818
tube1
Tubulin, epsilon 1; Belongs to the tubulin family.
    
   0.807
ENSACLP00000023484
Fibrinogen alpha chain.
   
 
0.800
LOC113031539
ETHE1 persulfide dioxygenase.
    
   0.794
lcmt2
Leucine carboxyl methyltransferase 2.
    
   0.731
LOC113014480
Angiopoietin 2b.
  
  
 
0.655
angptl7
Angiopoietin-like 7.
     
 
0.641
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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