STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C1General transcription factor IIIC subunit 1. (2218 aa)    
Predicted Functional Partners:
gtf3c5
General transcription factor IIIC, polypeptide 5.
   
 0.980
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.976
gtf3c2
General transcription factor IIIC, polypeptide 2, beta.
   
 0.971
gtf3c4
General transcription factor IIIC, polypeptide 4.
   
 0.968
LOC113006820
Zinc finger protein 512.
   
 0.884
znf512b
Zinc finger protein 512B.
   
 0.884
LOC113012693
BRF1 RNA polymerase III transcription initiation factor subunit.
   
 
 0.873
LOC113037338
BRF1 RNA polymerase III transcription initiation factor subunit b.
   
 
 0.873
LOC113025474
Uncharacterized protein.
    
 0.865
ENSACLP00000015793
General transcription factor IIIAa.
    
 0.862
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.