ENSACLP00000007300 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000007300

Ig-like domain-containing protein. (139 aa)

Predicted Functional Partners:

ENSACLP00000024801

0.635

LOC113009905

0.577

ENSACLP00000016464

0.564

syk

0.564

LOC113034504

0.559

adrb1

0.559

ENSACLP00000001760

0.552

ENSACLP00000001789

0.552

LOC113006847

0.552

ENSACLP00000001983

0.552

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001760	ENSACLP00000007300	ENSACLP00000001760	ENSACLP00000007300	Kringle domain-containing protein.	Ig-like domain-containing protein.	0.552
ENSACLP00000001789	ENSACLP00000007300	ENSACLP00000001789	ENSACLP00000007300	Uncharacterized protein; Belongs to the peptidase S1 family.	Ig-like domain-containing protein.	0.552
ENSACLP00000001983	ENSACLP00000007300	ENSACLP00000001983	ENSACLP00000007300	Kringle domain-containing protein.	Ig-like domain-containing protein.	0.552
ENSACLP00000007300	ENSACLP00000001760	ENSACLP00000007300	ENSACLP00000001760	Ig-like domain-containing protein.	Kringle domain-containing protein.	0.552
ENSACLP00000007300	ENSACLP00000001789	ENSACLP00000007300	ENSACLP00000001789	Ig-like domain-containing protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.552
ENSACLP00000007300	ENSACLP00000001983	ENSACLP00000007300	ENSACLP00000001983	Ig-like domain-containing protein.	Kringle domain-containing protein.	0.552
ENSACLP00000007300	ENSACLP00000016464	ENSACLP00000007300	ENSACLP00000016464	Ig-like domain-containing protein.	Tyrosine-protein kinase.	0.564
ENSACLP00000007300	ENSACLP00000024801	ENSACLP00000007300	ENSACLP00000024801	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.635
ENSACLP00000007300	LOC113006847	ENSACLP00000007300	ENSACLP00000001796	Ig-like domain-containing protein.	Plasminogen; Belongs to the peptidase S1 family.	0.552
ENSACLP00000007300	LOC113009905	ENSACLP00000007300	ENSACLP00000040269	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.577
ENSACLP00000007300	LOC113034504	ENSACLP00000007300	ENSACLP00000001915	Ig-like domain-containing protein.	Adrenoceptor beta 2, surface a; Belongs to the G-protein coupled receptor 1 family.	0.559
ENSACLP00000007300	adrb1	ENSACLP00000007300	ENSACLP00000020991	Ig-like domain-containing protein.	Adrenoceptor beta 1.	0.559
ENSACLP00000007300	syk	ENSACLP00000007300	ENSACLP00000033853	Ig-like domain-containing protein.	Tyrosine-protein kinase.	0.564
ENSACLP00000016464	ENSACLP00000007300	ENSACLP00000016464	ENSACLP00000007300	Tyrosine-protein kinase.	Ig-like domain-containing protein.	0.564
ENSACLP00000016464	ENSACLP00000024801	ENSACLP00000016464	ENSACLP00000024801	Tyrosine-protein kinase.	Ig-like domain-containing protein.	0.508
ENSACLP00000024801	ENSACLP00000007300	ENSACLP00000024801	ENSACLP00000007300	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.635
ENSACLP00000024801	ENSACLP00000016464	ENSACLP00000024801	ENSACLP00000016464	Ig-like domain-containing protein.	Tyrosine-protein kinase.	0.508
ENSACLP00000024801	LOC113009905	ENSACLP00000024801	ENSACLP00000040269	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.999
ENSACLP00000024801	syk	ENSACLP00000024801	ENSACLP00000033853	Ig-like domain-containing protein.	Tyrosine-protein kinase.	0.508
LOC113006847	ENSACLP00000007300	ENSACLP00000001796	ENSACLP00000007300	Plasminogen; Belongs to the peptidase S1 family.	Ig-like domain-containing protein.	0.552