Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007305Uncharacterized protein. (4530 aa)    
Predicted Functional Partners:
ENSACLP00000004661
Brevican.
    
 0.759
LOC113015316
Uncharacterized protein.
    
 0.759
LOC113009045
Decorin; May affect the rate of fibrils formation.
   
 0.719
aspn
Asporin.
    
 0.613
bgn
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
    
 0.613
ENSACLP00000012122
Uncharacterized protein.
    
 0.576
LOC113028596
Fam20C domain-containing protein.
    
  0.573
ENSACLP00000041544
FAM20C golgi associated secretory pathway kinase a.
    
  0.573
mmp9
Matrix metallopeptidase 9.
    
 0.560
tnn
Tenascin N.
    
 0.551
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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