STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncapd3Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis. (1397 aa)    
Predicted Functional Partners:
ncapg2
Non-SMC condensin II complex, subunit G2.
   
 0.999
ncaph2
Non-SMC condensin II complex, subunit H2.
   
 0.999
ENSACLP00000016191
Structural maintenance of chromosomes protein.
   
 0.999
smc4
Structural maintenance of chromosomes protein.
   
 0.987
smc3
Structural maintenance of chromosomes protein.
   
 0.927
ENSACLP00000003331
SMC_N domain-containing protein.
   
 0.905
ENSACLP00000004637
Structural maintenance of chromosomes 6.
   
 0.887
smc1a
Structural maintenance of chromosomes protein.
   
 0.887
smc6
Si:dkey-119f1.1.
   
 0.887
LOC113026355
Structural maintenance of chromosomes protein.
   
 0.887
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.