STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021370Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (337 aa)    
Predicted Functional Partners:
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.598
utp18
WD_REPEATS_REGION domain-containing protein.
   
  
 0.562
RPL5
Ribosomal protein L5.
    
 
 0.533
RPL5-2
Ribosomal protein L5b.
    
 
 0.533
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.519
wdr43
WD repeat domain 43.
   
    0.499
gtpbp4
GTP binding protein 4.
   
    0.489
wdr36
WD repeat domain 36.
   
    0.485
LOC113016769
PWP2 small subunit processome component.
   
    0.485
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
    0.485
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.