STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ascc1Activating signal cointegrator 1 complex subunit 1. (354 aa)    
Predicted Functional Partners:
ascc2
Activating signal cointegrator 1 complex subunit 2.
    
 0.971
ENSACLP00000009524
Uncharacterized protein.
    
 0.928
ENSACLP00000009908
Activating signal cointegrator 1 complex subunit 3.
    
 0.928
trip4
Thyroid hormone receptor interactor 4.
    
 
 0.927
ybey
YbeY metalloendoribonuclease.
    
   0.897
dap3
Death associated protein 3.
    
   0.897
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
   0.897
ENSACLP00000006383
Si:dkey-159f12.2.
    
   0.878
mrpl13
Mitochondrial ribosomal protein L13.
   
   0.858
mrpl15
Mitochondrial ribosomal protein L15.
    
   0.854
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.