Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lztfl1Leucine zipper transcription factor-like 1. (298 aa)    
Predicted Functional Partners:
ENSACLP00000019213
Bardet-Biedl syndrome 7.
    
 0.998
bbs2
Bardet-Biedl syndrome 2 protein homolog.
    
 0.997
bbs9
Bardet-Biedl syndrome 9.
    
 0.996
ttc8
Tetratricopeptide repeat domain 8.
   
 0.996
ENSACLP00000019941
Bardet-Biedl syndrome 4.
  
 0.993
bbs1
Bardet-Biedl syndrome 1.
    
 0.985
bbs5
Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.
   
 0.964
klhl41
Kelch-like family member 41a.
   
 0.917
LOC113010519
Kelch-like family member 40a.
   
 0.917
LOC113016133
BTB domain-containing protein.
   
 0.917
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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