Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ablim2Actin binding LIM protein family, member 2. (652 aa)    
Predicted Functional Partners:
ENSACLP00000009243
HP domain-containing protein.
    
 0.891
ENSACLP00000015725
Dematin actin binding protein.
    
 0.891
ENSACLP00000032945
Actin binding LIM protein 1a.
    
 0.891
LOC113022989
Cell division cycle 42.
     
 0.882
ENSACLP00000001596
Actin binding LIM protein family, member 3.
     
  0.866
ENSACLP00000012464
Actin binding LIM protein family member 3.
     
  0.866
asxl2
ASXL transcriptional regulator 2.
    
   0.851
KDM1B
Lysine demethylase 1B.
    
   0.829
LOC113015068
Cell division cycle 42, like.
     
 0.790
ENSACLP00000023060
Cell division cycle 42, like.
     
 0.790
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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