Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cspg5Chondroitin sulfate proteoglycan 5a. (530 aa)    
Predicted Functional Partners:
ENSACLP00000000830
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
     
  0.859
smarcc1
Uncharacterized protein.
     
  0.824
LOC113014160
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.
     
  0.824
ENSACLP00000007305
Uncharacterized protein.
   
 
 0.420
LOC113025192
Versican b.
   
 
 0.420
LOC113029073
Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family.
      
 0.413
ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
      
 0.412
mysm1
Myb-like, SWIRM and MPN domains 1.
     
  0.401
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.