ENSACLP00000007421 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000007421

Uncharacterized protein. (259 aa)

Predicted Functional Partners:

hsp90b1

0.940

stip1

0.894

ppp5c

0.846

pink1

0.821

cdk9

0.794

ENSACLP00000001630

0.789

LOC113037291

0.789

LOC113037290

0.789

ENSACLP00000012749

0.789

ENSACLP00000024753

0.789

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001630	ENSACLP00000007421	ENSACLP00000001630	ENSACLP00000007421	Uncharacterized protein.	Uncharacterized protein.	0.789
ENSACLP00000001630	LOC113037290	ENSACLP00000001630	ENSACLP00000008536	Uncharacterized protein.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	0.819
ENSACLP00000001630	LOC113037291	ENSACLP00000001630	ENSACLP00000007667	Uncharacterized protein.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.819
ENSACLP00000001630	cdk9	ENSACLP00000001630	ENSACLP00000007818	Uncharacterized protein.	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.	0.767
ENSACLP00000001630	hsp90b1	ENSACLP00000001630	ENSACLP00000006955	Uncharacterized protein.	Heat shock protein 90, beta (grp94), member 1.	0.981
ENSACLP00000001630	pink1	ENSACLP00000001630	ENSACLP00000029037	Uncharacterized protein.	PTEN induced kinase 1.	0.807
ENSACLP00000001630	ppp5c	ENSACLP00000001630	ENSACLP00000028233	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.937
ENSACLP00000001630	stip1	ENSACLP00000001630	ENSACLP00000014419	Uncharacterized protein.	Stress-induced phosphoprotein 1.	0.981
ENSACLP00000007421	ENSACLP00000001630	ENSACLP00000007421	ENSACLP00000001630	Uncharacterized protein.	Uncharacterized protein.	0.789
ENSACLP00000007421	ENSACLP00000012749	ENSACLP00000007421	ENSACLP00000012749	Uncharacterized protein.	Uncharacterized protein.	0.789
ENSACLP00000007421	ENSACLP00000024753	ENSACLP00000007421	ENSACLP00000024753	Uncharacterized protein.	Uncharacterized protein.	0.789
ENSACLP00000007421	LOC113037290	ENSACLP00000007421	ENSACLP00000008536	Uncharacterized protein.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	0.789
ENSACLP00000007421	LOC113037291	ENSACLP00000007421	ENSACLP00000007667	Uncharacterized protein.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.789
ENSACLP00000007421	cdk9	ENSACLP00000007421	ENSACLP00000007818	Uncharacterized protein.	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.	0.794
ENSACLP00000007421	hsp90b1	ENSACLP00000007421	ENSACLP00000006955	Uncharacterized protein.	Heat shock protein 90, beta (grp94), member 1.	0.940
ENSACLP00000007421	pink1	ENSACLP00000007421	ENSACLP00000029037	Uncharacterized protein.	PTEN induced kinase 1.	0.821
ENSACLP00000007421	ppp5c	ENSACLP00000007421	ENSACLP00000028233	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.846
ENSACLP00000007421	stip1	ENSACLP00000007421	ENSACLP00000014419	Uncharacterized protein.	Stress-induced phosphoprotein 1.	0.894
ENSACLP00000012749	ENSACLP00000007421	ENSACLP00000012749	ENSACLP00000007421	Uncharacterized protein.	Uncharacterized protein.	0.789
ENSACLP00000012749	cdk9	ENSACLP00000012749	ENSACLP00000007818	Uncharacterized protein.	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.	0.505