STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113027798Pyrophosphatase (inorganic) 1a. (288 aa)    
Predicted Functional Partners:
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 
 0.942
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 0.928
atp5f1c
ATP synthase subunit gamma.
  
 
 0.926
atp6v0b
ATPase H+ transporting V0 subunit b; Belongs to the V-ATPase proteolipid subunit family.
  
 
 0.906
LOC113007670
ATP synthase membrane subunit c locus 2; Belongs to the ATPase C chain family.
  
 
 0.892
ENSACLP00000036621
ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.
  
 
 0.892
atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.891
LOC113033154
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.891
atp6v1d
ATPase H+ transporting V1 subunit D.
   
 
  0.881
LOC113030109
Lysine (K)-specific demethylase 6B, b.
  
 
 0.878
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.