STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023506Myotubularin related protein 7b. (652 aa)    
Predicted Functional Partners:
ENSACLP00000029064
Zgc:154055.
  
0.920
mtmr9
Myotubularin related protein 9.
  
0.918
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.899
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
 
 0.889
ENSACLP00000034439
Phosphoinositide kinase, FYVE finger containing.
     
 0.885
LOC113031398
SAC domain-containing protein.
     
 0.884
LOC113014101
SAC1 like phosphatidylinositide phosphatase a.
     
 0.884
ENSACLP00000001491
Myotubularin related protein 3.
    
0.871
mtmr14
Myotubularin related protein 14.
     
 0.866
mtmr2
Myotubularin related protein 2.
  
 
0.865
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.