Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000007438Bap31 domain-containing protein. (193 aa)    
Predicted Functional Partners:
ENSACLP00000014386
SEC63 homolog, protein translocation regulator.
    
 
 0.861
LOC113017771
MSP domain-containing protein.
   
 0.722
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
   
 0.722
LOC113013172
MSP domain-containing protein.
   
 0.722
ENSACLP00000031727
VAMP (vesicle-associated membrane protein)-associated protein B and C.
   
 0.722
mospd1
Motile sperm domain containing 1.
   
 0.722
phb
Prohibitin.
   
   0.630
LOC113034081
Un-named hu7912.
   
 
 0.538
rer1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
   
 
 0.538
agr2
Anterior gradient 2.
    
 
 0.527
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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