Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc20Leucine rich repeat containing 20. (174 aa)    
Predicted Functional Partners:
LOC113015033
Uncharacterized protein.
     
  0.854
npff
Neuropeptide FF-amide peptide precursor like.
     
  0.854
ENSACLP00000004833
Neuropeptide FF receptor 1 like 2; Belongs to the G-protein coupled receptor 1 family.
     
  0.749
NPFFR2
Neuropeptide FF receptor 2; Belongs to the G-protein coupled receptor 1 family.
     
  0.749
gpr135
G protein-coupled receptor 135; Belongs to the G-protein coupled receptor 1 family.
     
  0.749
LOC113027643
Ankyrin repeat and SOCS box-containing 12a.
   
 
 0.749
ENSACLP00000040225
Neuropeptide FF receptor 2b; Belongs to the G-protein coupled receptor 1 family.
     
  0.749
asb16
Ankyrin repeat and SOCS box containing 16.
   
 
 0.743
tmem38a
Transmembrane protein 38A.
   
 
 0.706
slitrk6
SLIT and NTRK-like family, member 6.
      
 0.697
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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