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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007443GLI family zinc finger 3. (1554 aa)    
Predicted Functional Partners:
kif7
Kinesin family member 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.962
LOC113036715
F-box and WD repeat domain containing 11b.
    
 0.949
ENSACLP00000011345
Suppressor of fused homolog.
    
 0.944
SPOP
Speckle type BTB/POZ protein.
   
 0.938
spopl
Speckle type BTB/POZ protein like b.
   
 0.938
LOC113020347
Speckle type BTB/POZ protein.
   
 0.938
kif3a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.897
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.896
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
    
 0.894
LOC113011333
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.886
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.