STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007454Ig-like domain-containing protein. (104 aa)    
Predicted Functional Partners:
ENSACLP00000024801
Ig-like domain-containing protein.
    
  0.629
LOC113009905
Ig-like domain-containing protein.
    
  0.570
ENSACLP00000005906
Relaxin family peptide receptor 2a.
    
  0.541
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
  0.541
ENSACLP00000017254
Relaxin family peptide receptor 1.
    
  0.541
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
  0.541
ENSACLP00000016464
Tyrosine-protein kinase.
    
  0.530
syk
Tyrosine-protein kinase.
    
  0.530
LOC113034504
Adrenoceptor beta 2, surface a; Belongs to the G-protein coupled receptor 1 family.
    
  0.524
adrb1
Adrenoceptor beta 1.
    
  0.524
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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