Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000007458POU domain protein. (282 aa)    
Predicted Functional Partners:
snapc4
Uncharacterized protein.
    
  0.551
snapc3
Small nuclear RNA activating complex, polypeptide 3.
    
  0.530
bsx
Brain-specific homeobox.
    
 0.522
snapc1
Small nuclear RNA activating complex, polypeptide 1b.
    
  0.510
ENSACLP00000021585
Uncharacterized protein.
    
  0.510
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
     
 0.508
c14h11orf53
Si:ch211-213d14.1.
    
 
 0.502
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
  0.463
gtf2b
General transcription factor IIB.
    
 0.453
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
     
 0.428
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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