STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113035276Uncharacterized protein. (1742 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
  0.857
ENSACLP00000025029
DUF1891 domain-containing protein.
  
 
 
0.854
ENSACLP00000026749
PDZ domain-containing protein.
  
 
 
0.846
LOC113032182
Protein S100; Belongs to the S-100 family.
    
  0.831
ahnak
AHNAK nucleoprotein.
  
 
 
0.723
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.595
LOC113015368
Protein S100; Belongs to the S-100 family.
    
  0.591
LOC113015370
Uncharacterized protein.
    
  0.591
ENSACLP00000004561
S_100 domain-containing protein; Belongs to the S-100 family.
    
  0.535
S100P
Protein S100; Belongs to the S-100 family.
    
  0.535
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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