STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007479Uncharacterized protein. (389 aa)    
Predicted Functional Partners:
acot8
Acyl-CoA thioesterase 8.
     
 0.884
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.873
LOC113016539
Sterol carrier protein 2b.
     
 0.873
LOC113026230
Acyl-CoA thioesterase 19.
  
 
 
0.853
acot7
Acyl-CoA thioesterase 7.
  
 
 0.853
gad2
Glutamate decarboxylase 2.
   
 
  0.848
ENSACLP00000007650
Uncharacterized protein.
   
 
  0.835
LOC113018431
Thioesterase superfamily member 4.
     
 0.830
LOC113018431-2
Acyl-coenzyme A thioesterase THEM4-like.
     
 0.830
gad1
Glutamate decarboxylase 1a.
   
 
  0.827
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.