STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007486EDAR-associated death domain. (152 aa)    
Predicted Functional Partners:
edar
Ectodysplasin A receptor.
    
 0.952
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.934
ENSACLP00000021173
CCR4-NOT transcription complex, subunit 1.
    
 
 0.777
ENSACLP00000028496
Uncharacterized protein.
   
 
 0.754
ENSACLP00000028563
Pumilio RNA-binding family member 1.
   
 
 0.754
pum2
Pumilio RNA-binding family member 2.
   
 
 0.754
LOC113025693
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.651
traf4
TNF receptor-associated factor.
    
 0.644
LOC113033094
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.643
LOC113025455
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.643
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (22%) [HD]