Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007521Uncharacterized protein. (707 aa)    
Predicted Functional Partners:
ENSACLP00000016795
Usher syndrome 2A (autosomal recessive, mild).
    
 0.591
ENSACLP00000005618
Usher syndrome 1C.
    
 
 0.556
ENSACLP00000032038
Uncharacterized protein.
    
 0.553
ENSACLP00000033113
Tectorin alpha.
    
 0.549
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.544
ENSACLP00000037094
Im:7152348.
   
 0.520
inha
Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.
    
 0.519
slitrk6
SLIT and NTRK-like family, member 6.
    
 0.502
frem1
Fras1 related extracellular matrix 1a.
    
 0.493
ENSACLP00000030575
Fras1 related extracellular matrix 1b.
    
 0.493
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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