Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000007531Proteasome subunit beta. (299 aa)    
Predicted Functional Partners:
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
 0.999
psma3
Proteasome subunit alpha type.
   
 0.999
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.999
LOC113016206
Proteasome subunit beta.
   
 0.999
psmb1
Proteasome subunit beta.
   
0.999
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
  
 0.999
ENSACLP00000013657
Proteasome subunit beta.
   
 0.999
ENSACLP00000014651
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
 0.999
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
  
 0.999
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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