STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007556Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
il6st
Uncharacterized protein.
    
 0.988
cntfr
Ciliary neurotrophic factor receptor.
    
 0.941
LOC113031710
Uncharacterized protein.
    
 0.921
LOC113032175
Interleukin 11a.
     
 0.918
clcf1
Cardiotrophin-like cytokine factor 1.
     
 0.907
LOC113025750
IL-6 subfamily cytokine M17.
     
 0.883
il13ra2
Interleukin 13 receptor, alpha 2.
     
 0.876
galt
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
     
 0.876
LOC113033755
Uncharacterized protein.
     
  0.871
LOC113016946
Uncharacterized protein.
     
 0.866
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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