STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlcd1TLC domain containing 1. (256 aa)    
Predicted Functional Partners:
dhrs7b
Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.657
LOC113034610
Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.607
rdh12
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.565
ENSACLP00000000070
Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.534
LOC113034611
Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.534
dhrs11
Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.533
traf4
TNF receptor-associated factor.
      
 0.518
cept1
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.513
ENSACLP00000021789
RIMS binding protein 2.
      
 0.508
dhrs7c
Dehydrogenase/reductase (SDR family) member 7Ca.
    
 
 0.490
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.