micall2 protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

micall2

Mical-like 2a. (770 aa)

Predicted Functional Partners:

LOC113031680

0.913

ENSACLP00000003132

0.862

LOC113010868

0.862

LOC113026766

0.862

LOC113026857

0.862

ACTN4

0.854

actn3

0.854

LOC113034931

0.854

actn1

0.854

eif3l

0.852

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTN4	ENSACLP00000003132	ENSACLP00000021013	ENSACLP00000003132	Actinin alpha 4.	RAB8A, member RAS oncogene family.	0.440
ACTN4	LOC113010868	ENSACLP00000021013	ENSACLP00000015464	Actinin alpha 4.	RAB8A, member RAS oncogene family.	0.440
ACTN4	LOC113026766	ENSACLP00000021013	ENSACLP00000027022	Actinin alpha 4.	Multiple EGF-like-domains 8.	0.440
ACTN4	LOC113026857	ENSACLP00000021013	ENSACLP00000036058	Actinin alpha 4.	Uncharacterized protein.	0.440
ACTN4	LOC113031680	ENSACLP00000021013	ENSACLP00000028966	Actinin alpha 4.	Uncharacterized protein.	0.440
ACTN4	eif3l	ENSACLP00000021013	ENSACLP00000031880	Actinin alpha 4.	Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.841
ACTN4	micall2	ENSACLP00000021013	ENSACLP00000007569	Actinin alpha 4.	Mical-like 2a.	0.854
ENSACLP00000003132	ACTN4	ENSACLP00000003132	ENSACLP00000021013	RAB8A, member RAS oncogene family.	Actinin alpha 4.	0.440
ENSACLP00000003132	LOC113034931	ENSACLP00000003132	ENSACLP00000031725	RAB8A, member RAS oncogene family.	Actinin, alpha 2b.	0.440
ENSACLP00000003132	actn1	ENSACLP00000003132	ENSACLP00000040434	RAB8A, member RAS oncogene family.	Actinin, alpha 1.	0.440
ENSACLP00000003132	actn3	ENSACLP00000003132	ENSACLP00000021286	RAB8A, member RAS oncogene family.	Actinin alpha 3b.	0.440
ENSACLP00000003132	eif3l	ENSACLP00000003132	ENSACLP00000031880	RAB8A, member RAS oncogene family.	Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.840
ENSACLP00000003132	micall2	ENSACLP00000003132	ENSACLP00000007569	RAB8A, member RAS oncogene family.	Mical-like 2a.	0.862
LOC113010868	ACTN4	ENSACLP00000015464	ENSACLP00000021013	RAB8A, member RAS oncogene family.	Actinin alpha 4.	0.440
LOC113010868	LOC113034931	ENSACLP00000015464	ENSACLP00000031725	RAB8A, member RAS oncogene family.	Actinin, alpha 2b.	0.440
LOC113010868	actn1	ENSACLP00000015464	ENSACLP00000040434	RAB8A, member RAS oncogene family.	Actinin, alpha 1.	0.440
LOC113010868	actn3	ENSACLP00000015464	ENSACLP00000021286	RAB8A, member RAS oncogene family.	Actinin alpha 3b.	0.440
LOC113010868	eif3l	ENSACLP00000015464	ENSACLP00000031880	RAB8A, member RAS oncogene family.	Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.840
LOC113010868	micall2	ENSACLP00000015464	ENSACLP00000007569	RAB8A, member RAS oncogene family.	Mical-like 2a.	0.862
LOC113026766	ACTN4	ENSACLP00000027022	ENSACLP00000021013	Multiple EGF-like-domains 8.	Actinin alpha 4.	0.440