STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMX3Thioredoxin related transmembrane protein 3. (487 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
   
 0.855
tmx1
Thioredoxin-related transmembrane protein 1.
   
 
 0.756
LOC113026374
RIC3 domain-containing protein.
    
 0.696
LOC113031405
Cytochrome b5 reductase 4.
  
 0.683
unc50
Unc-50 homolog (C. elegans).
      
 0.654
ENSACLP00000024401
Calnexin.
   
 0.646
LOC113023638
Calmegin.
   
 0.643
SCCPDH
Saccharopine dehydrogenase a, tandem duplicate 1.
      
 0.623
LOC113022358
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
   
 
 0.597
ENSACLP00000013466
Endoplasmic reticulum oxidoreductase alpha.
    
 0.571
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.