STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007575Piwi domain-containing protein. (304 aa)    
Predicted Functional Partners:
tdrd1
Tudor domain containing 1.
   
 0.839
LOC113011975
Uncharacterized protein.
   
 0.825
LOC113037193
Uncharacterized protein.
   
 0.825
LOC113037239
Si:dkeyp-93d12.1.
   
 0.815
tdrkh
Tudor and KH domain containing.
   
 0.789
ENSACLP00000030882
Tudor domain containing 9.
   
 0.759
rnf17
Ring finger protein 17.
   
 0.708
tdrd5
Uncharacterized protein.
   
 0.700
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 0.698
LOC113023918
Tudor domain containing 7 a.
   
 0.680
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.