Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007575Piwi domain-containing protein. (304 aa)    
Predicted Functional Partners:
ENSACLP00000030882
Tudor domain containing 9.
   
 0.929
tdrkh
Tudor and KH domain containing.
   
 0.916
tdrd1
Tudor domain containing 1.
   
 0.882
LOC113011975
Uncharacterized protein.
   
 0.861
LOC113037193
Uncharacterized protein.
   
 0.861
LOC113037239
Si:dkeyp-93d12.1.
   
 0.837
dicer1
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.772
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 0.738
LOC113013408
Zgc:56699.
   
 
 0.735
akap1
A kinase (PRKA) anchor protein 1b.
   
 0.711
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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