STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neurod4Neuronal differentiation 4. (352 aa)    
Predicted Functional Partners:
HES2
Hes family bHLH transcription factor 2, tandem duplicate 1.
   
 0.571
LOC113013538
Hairy-related 12.
   
 0.567
HES2-2
Hes family bHLH transcription factor 2, tandem duplicate 1.
   
 0.543
ENSACLP00000017965
Hairy-related 8.2.
    
 0.537
hes1
Hairy-related 6.
    
 0.533
LOC113010672
Uncharacterized protein.
    
 0.529
hes4
Hairy-related 9.
    
 0.529
LOC113016358
BHLH domain-containing protein.
   
 
0.508
TCF4
Transcription factor 4.
    
 
 0.507
LOC113010171
Transcription factor 3a.
    
 
 0.507
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.