STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113013372Baculoviral IAP repeat containing 5b. (144 aa)    
Predicted Functional Partners:
cdca8
Cell division cycle associated 8.
   
 0.996
ENSACLP00000018315
Uncharacterized protein.
   
 0.991
LOC113008948
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.976
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.976
LOC113007807
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.973
LOC113016114
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.973
LOC113036951
Diablo, IAP-binding mitochondrial protein a.
    
 0.954
LOC113036932
Diablo, IAP-binding mitochondrial protein a.
    
 0.950
ENSACLP00000009370
Uncharacterized protein.
    
 0.950
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.947
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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