Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLSPNClaspin. (1037 aa)    
Predicted Functional Partners:
ENSACLP00000030513
Checkpoint kinase 1; Belongs to the protein kinase superfamily.
   
 0.998
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
 0.993
ENSACLP00000007188
DNA topoisomerase II binding protein 1.
   
 0.991
rpa3
Replication protein A3.
    
 0.991
timeless
Timeless circadian clock.
   
 0.986
cdc7
Cell division cycle 7 homolog (S. cerevisiae).
   
 0.984
primpol
Primase and polymerase (DNA-directed).
   
 
 0.984
ENSACLP00000013582
Uncharacterized protein.
   
 0.978
gins3
GINS complex subunit 3.
   
 
 0.976
ENSACLP00000008384
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.975
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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