Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113026114Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (647 aa)    
Predicted Functional Partners:
LOC113014528
Carnitine O-acetyltransferase b.
     
  0.848
crat
Zgc:154046; Belongs to the carnitine/choline acetyltransferase family.
     
  0.848
ENSACLP00000009054
Ribonuclease P/MRP 14 subunit.
   
 0.837
LOC113035076
Solute carrier family 18 member 3a.
   
 
 0.832
LOC113030206
Malate synthase-like.
   
  
 0.768
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.752
ENSACLP00000024264
Enoyl-CoA delta isomerase 2.
   
 0.750
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.748
LOC113016539
Sterol carrier protein 2b.
   
 0.748
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
     
 0.747
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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