STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007618Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (477 aa)    
Predicted Functional Partners:
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
 
 0.992
urod
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.990
ENDOV
Endonuclease V.
  
 
 0.987
oat
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.932
LOC113016274
Coproporphyrinogen oxidase.
  
 
 0.930
LOC113016274-2
Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial-like.
  
 
 0.930
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
    
 0.905
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
    
 0.905
uros
Uroporphyrinogen III synthase.
  
 
 0.897
rnls
Renalase, FAD-dependent amine oxidase.
     
 0.895
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.