Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
ctnsCystinosin, lysosomal cystine transporter. (381 aa)    
Predicted Functional Partners:
shpk
Sedoheptulokinase.
      
 0.813
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.771
ENSACLP00000002436
Si:dkey-24p1.6.
   
 
  0.769
sel1l3
Uncharacterized protein.
   
 
  0.769
slc66a1
Solute carrier family 66 member 1.
    
 
 0.734
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.727
ENSACLP00000015084
Uncharacterized protein.
   
 
  0.723
lamp1
Lysosomal associated membrane protein 1a.
      
 0.650
ENSACLP00000002721
Sulfatase modifying factor 1.
      
 0.636
pi4k2b
Phosphatidylinositol 4-kinase type 2 beta.
   
  
 0.636
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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