Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC113036438Zgc:158328. (1626 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
    
 0.720
ENSACLP00000034482
WD repeat containing, antisense to TP73.
    
 
 0.649
ENSACLP00000028064
HMG box domain containing 4a.
      
 0.643
LOC113031438
Si:ch211-113g11.6; Belongs to the semaphorin family.
     
 0.614
LTN1
Listerin E3 ubiquitin protein ligase 1.
      
 0.585
ENSACLP00000000275
Uncharacterized protein.
    
 0.579
ENSACLP00000001877
Fraser extracellular matrix complex subunit 1.
   
 0.567
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.567
LOC113022284
Macrophage stimulating 1 receptor a.
    
 0.567
LOC113007607
Ligand of numb-protein X 2b.
    
 
 0.556
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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